Index

_

__init__() (s3dgraphy.edges.edge.Edge method), [1] (s3dgraphy.exporter.unified_xlsx_exporter.UnifiedXLSXExporter method) (s3dgraphy.graph.Graph method) (s3dgraphy.importer.unified_xlsx_importer.UnifiedXLSXImporter method) (s3dgraphy.multigraph.multigraph.MultiGraphManager method) (s3dgraphy.nodes.base_node.Node method) (s3dgraphy.nodes.epoch_node.EpochNode method) (s3dgraphy.nodes.geo_position_node.GeoPositionNode method) (s3dgraphy.nodes.graph_node.GraphNode method) (s3dgraphy.nodes.group_node.ActivityNodeGroup method) (s3dgraphy.nodes.group_node.GroupNode method) (s3dgraphy.nodes.group_node.LocationNodeGroup method) (s3dgraphy.nodes.group_node.ParadataNodeGroup method) (s3dgraphy.nodes.group_node.TimeBranchNodeGroup method) (s3dgraphy.nodes.paradata_node.ParadataNode method) (s3dgraphy.nodes.representation_node.RepresentationModelDocNode method) (s3dgraphy.nodes.representation_node.RepresentationModelNode method) (s3dgraphy.nodes.representation_node.RepresentationModelSpecialFindNode method) (s3dgraphy.nodes.representation_node.RepresentationNode method) (s3dgraphy.nodes.stratigraphic_node.ContinuityNode method) (s3dgraphy.nodes.stratigraphic_node.DocumentaryStratigraphicUnit method) (s3dgraphy.nodes.stratigraphic_node.NegativeStratigraphicUnit method) (s3dgraphy.nodes.stratigraphic_node.NonStructuralVirtualStratigraphicUnit method) (s3dgraphy.nodes.stratigraphic_node.ReusedSpecialFind method) (s3dgraphy.nodes.stratigraphic_node.SeriesOfDocumentaryStratigraphicUnit method) (s3dgraphy.nodes.stratigraphic_node.SeriesOfNonStructuralVirtualStratigraphicUnit method) (s3dgraphy.nodes.stratigraphic_node.SeriesOfStratigraphicUnit method) (s3dgraphy.nodes.stratigraphic_node.SeriesOfStructuralVirtualStratigraphicUnit method) (s3dgraphy.nodes.stratigraphic_node.SpecialFindUnit method) (s3dgraphy.nodes.stratigraphic_node.StratigraphicEventNode method) (s3dgraphy.nodes.stratigraphic_node.StratigraphicNode method) (s3dgraphy.nodes.stratigraphic_node.StratigraphicUnit method) (s3dgraphy.nodes.stratigraphic_node.StructuralVirtualStratigraphicUnit method) (s3dgraphy.nodes.stratigraphic_node.TransformationStratigraphicUnit method) (s3dgraphy.nodes.stratigraphic_node.UnknownNode method) (s3dgraphy.nodes.stratigraphic_node.VirtualSpecialFindUnit method) (s3dgraphy.nodes.stratigraphic_node.WorkingUnit method) (s3dgraphy.resolvers.property_resolver.PropagationRule method) (s3dgraphy.temporal.inference_engine.TemporalInferenceEngine method)

__repr__() (s3dgraphy.edges.edge.Edge method), [1]

A

ActivityNodeGroup (class in s3dgraphy.nodes.group_node) add_attribute() (s3dgraphy.nodes.base_node.Node method) add_edge() (s3dgraphy.graph.Graph method) add_graph_prefix() (in module s3dgraphy.utils.utils) add_node() (s3dgraphy.graph.Graph method) add_warning() (s3dgraphy.graph.Graph method)

ALL_US_TYPES (in module s3dgraphy.classification) apply_override_reversal_policy() (in module s3dgraphy.transforms.aux_tracking) attribute_property_node() (in module s3dgraphy.diagnostics) attribute_temporal_claim() (in module s3dgraphy.diagnostics) attributes (s3dgraphy.nodes.base_node.Node attribute) audio (s3dgraphy.graph.Graph attribute) aux_overridden_attrs() (in module s3dgraphy.transforms.aux_tracking)

C

calculate_chronology() (s3dgraphy.graph.Graph method) clear_aux_tags() (in module s3dgraphy.transforms.aux_tracking) clear_orphans() (in module s3dgraphy.transforms.aux_tracking) color (s3dgraphy.nodes.epoch_node.EpochNode attribute)

compact_propagative_metadata() (in module s3dgraphy.transforms.compact) connect_paradatagroup_propertynode_to_stratigraphic() (s3dgraphy.graph.Graph method) ContinuityNode (class in s3dgraphy.nodes.stratigraphic_node) convert_shape2type() (in module s3dgraphy.utils.utils)

D

data (s3dgraphy.graph.Graph attribute) debug_graph_structure() (in module s3dgraphy.utils.utils) dematerialize_continuity() (in module s3dgraphy.transforms.materialize_continuity) description (s3dgraphy.edges.edge.Edge attribute), [1] (s3dgraphy.graph.Graph attribute) (s3dgraphy.nodes.base_node.Node attribute)

detect_stratigraphic_cycles() (in module s3dgraphy.diagnostics) display_warnings() (s3dgraphy.graph.Graph method) DocumentaryStratigraphicUnit (class in s3dgraphy.nodes.stratigraphic_node)

E

Edge (class in s3dgraphy.edges.edge), [1] edge_id (s3dgraphy.edges.edge.Edge attribute), [1] edge_source (s3dgraphy.edges.edge.Edge attribute), [1] edge_target (s3dgraphy.edges.edge.Edge attribute), [1] edge_type (s3dgraphy.edges.edge.Edge attribute), [1]

EDGE_TYPES (in module s3dgraphy.edges.edge) edges (s3dgraphy.graph.Graph attribute) end_time (s3dgraphy.nodes.epoch_node.EpochNode attribute) EpochNode (class in s3dgraphy.nodes.epoch_node) extract_temporal_from_graph() (s3dgraphy.temporal.inference_engine.TemporalInferenceEngine method)

F

filter_nodes_by_connection_to_type() (s3dgraphy.graph.Graph method) filter_nodes_by_time_range() (s3dgraphy.graph.Graph method) find_edge_by_id() (s3dgraphy.graph.Graph method) find_edge_by_nodes() (s3dgraphy.graph.Graph method)

find_node_by_id() (s3dgraphy.graph.Graph method) find_node_by_name() (s3dgraphy.graph.Graph method) format_attribution() (in module s3dgraphy.diagnostics) freeze_aux_value() (in module s3dgraphy.transforms.aux_tracking)

G

generate_layout() (in module s3dgraphy.utils.visual_layout) GeoPositionNode (class in s3dgraphy.nodes.geo_position_node) get_ai_prompt() (in module s3dgraphy.utils.utils) get_all_graph_ids() (in module s3dgraphy.multigraph.multigraph) (s3dgraphy.multigraph.multigraph.MultiGraphManager method) get_ambiguous_relations() (s3dgraphy.temporal.inference_engine.TemporalInferenceEngine method) get_base_name() (in module s3dgraphy.utils.utils) get_combiner_nodes_for_property() (s3dgraphy.graph.Graph method) get_connected_edges() (s3dgraphy.graph.Graph method) get_connected_epoch_node_by_edge_type() (s3dgraphy.graph.Graph method) get_connected_epoch_nodes_list_by_edge_type() (s3dgraphy.graph.Graph method) get_connected_node_by_type() (s3dgraphy.graph.Graph method) get_connected_nodes() (s3dgraphy.graph.Graph method) get_connected_nodes_by_edge_type() (s3dgraphy.graph.Graph method) get_connected_nodes_by_filters() (s3dgraphy.graph.Graph method) get_datamodel() (s3dgraphy.edges.edge.Edge static method), [1] get_document_nodes_for_extractor() (s3dgraphy.graph.Graph method) get_document_variant_style() (in module s3dgraphy.utils.utils) get_document_vocabularies() (in module s3dgraphy.utils.utils) get_extractor_nodes_for_node() (s3dgraphy.graph.Graph method)

get_family() (in module s3dgraphy.classification) get_graph() (in module s3dgraphy.multigraph.multigraph) (s3dgraphy.multigraph.multigraph.MultiGraphManager method) get_graph_code_from_node() (in module s3dgraphy.utils.utils) get_material_color() (in module s3dgraphy.utils.utils) get_nodes_by_type() (s3dgraphy.graph.Graph method) get_original_node_id() (in module s3dgraphy.utils.utils) get_original_node_name() (in module s3dgraphy.utils.utils) get_paradata_chain() (s3dgraphy.graph.Graph method) get_property() (s3dgraphy.graph.Graph method) get_property_nodes_for_node() (s3dgraphy.graph.Graph method) get_reverse_name() (s3dgraphy.edges.edge.Edge method), [1] get_rule() (in module s3dgraphy.resolvers.property_resolver) get_stratigraphic_node_class() (in module s3dgraphy.utils.utils) get_subtype_info() (in module s3dgraphy.classification) get_temporal_order() (s3dgraphy.temporal.inference_engine.TemporalInferenceEngine method) Graph (class in s3dgraphy.graph) graph_getter() (s3dgraphy.resolvers.property_resolver.PropagationRule method) graph_id (s3dgraphy.graph.Graph attribute) GraphNode (class in s3dgraphy.nodes.graph_node) GroupNode (class in s3dgraphy.nodes.group_node)

H

hoist_propagative_metadata() (in module s3dgraphy.transforms.compact)

I

id (s3dgraphy.resolvers.property_resolver.PropagationRule attribute) indices (s3dgraphy.graph.Graph property) is_canonical() (s3dgraphy.edges.edge.Edge method), [1] is_injected() (in module s3dgraphy.transforms.aux_tracking) is_real() (in module s3dgraphy.classification)

is_series() (in module s3dgraphy.classification) is_symmetric() (s3dgraphy.edges.edge.Edge method), [1] is_virtual() (in module s3dgraphy.classification) iter_orphans() (in module s3dgraphy.transforms.aux_tracking) iter_subtypes() (in module s3dgraphy.classification)

L

label (s3dgraphy.edges.edge.Edge attribute), [1] (s3dgraphy.resolvers.property_resolver.PropagationRule attribute) list_rules() (in module s3dgraphy.resolvers.property_resolver)

load_graph() (s3dgraphy.multigraph.multigraph.MultiGraphManager method) load_graph_from_file() (in module s3dgraphy.multigraph.multigraph) load_json_mapping() (in module s3dgraphy.nodes.base_node) LocationNodeGroup (class in s3dgraphy.nodes.group_node)

M

manage_id_prefix() (in module s3dgraphy.utils.utils) mark_as_injected() (in module s3dgraphy.transforms.aux_tracking) materialize_continuity() (in module s3dgraphy.transforms.materialize_continuity) module s3dgraphy.classification s3dgraphy.diagnostics s3dgraphy.edges.edge, [1] s3dgraphy.exporter.unified_xlsx_exporter s3dgraphy.graph s3dgraphy.importer.unified_xlsx_importer s3dgraphy.multigraph.multigraph s3dgraphy.nodes.base_node s3dgraphy.nodes.epoch_node s3dgraphy.nodes.geo_position_node s3dgraphy.nodes.graph_node s3dgraphy.nodes.group_node s3dgraphy.nodes.paradata_node s3dgraphy.nodes.representation_node s3dgraphy.nodes.stratigraphic_node s3dgraphy.resolvers s3dgraphy.resolvers.builtin_rules s3dgraphy.resolvers.property_resolver s3dgraphy.temporal s3dgraphy.temporal.inference_engine s3dgraphy.transforms s3dgraphy.transforms.aux_tracking s3dgraphy.transforms.compact s3dgraphy.transforms.materialize_continuity s3dgraphy.utils.utils s3dgraphy.utils.visual_layout

MultiGraphManager (class in s3dgraphy.multigraph.multigraph)

N

name (s3dgraphy.graph.Graph attribute) (s3dgraphy.nodes.base_node.Node attribute) NegativeStratigraphicUnit (class in s3dgraphy.nodes.stratigraphic_node) Node (class in s3dgraphy.nodes.base_node) node_getter() (s3dgraphy.resolvers.property_resolver.PropagationRule method) node_id (s3dgraphy.nodes.base_node.Node attribute) node_type (s3dgraphy.nodes.base_node.Node attribute), [1] (s3dgraphy.nodes.epoch_node.EpochNode attribute) (s3dgraphy.nodes.geo_position_node.GeoPositionNode attribute) (s3dgraphy.nodes.graph_node.GraphNode attribute) (s3dgraphy.nodes.group_node.ActivityNodeGroup attribute) (s3dgraphy.nodes.group_node.GroupNode attribute) (s3dgraphy.nodes.group_node.LocationNodeGroup attribute) (s3dgraphy.nodes.group_node.ParadataNodeGroup attribute) (s3dgraphy.nodes.group_node.TimeBranchNodeGroup attribute) (s3dgraphy.nodes.paradata_node.ParadataNode attribute) (s3dgraphy.nodes.representation_node.RepresentationModelDocNode attribute), [1] (s3dgraphy.nodes.representation_node.RepresentationModelNode attribute), [1] (s3dgraphy.nodes.representation_node.RepresentationModelSpecialFindNode attribute), [1] (s3dgraphy.nodes.representation_node.RepresentationNode attribute), [1] (s3dgraphy.nodes.stratigraphic_node.ContinuityNode attribute) (s3dgraphy.nodes.stratigraphic_node.DocumentaryStratigraphicUnit attribute) (s3dgraphy.nodes.stratigraphic_node.NegativeStratigraphicUnit attribute) (s3dgraphy.nodes.stratigraphic_node.NonStructuralVirtualStratigraphicUnit attribute) (s3dgraphy.nodes.stratigraphic_node.ReusedSpecialFind attribute) (s3dgraphy.nodes.stratigraphic_node.SeriesOfDocumentaryStratigraphicUnit attribute) (s3dgraphy.nodes.stratigraphic_node.SeriesOfNonStructuralVirtualStratigraphicUnit attribute) (s3dgraphy.nodes.stratigraphic_node.SeriesOfStratigraphicUnit attribute) (s3dgraphy.nodes.stratigraphic_node.SeriesOfStructuralVirtualStratigraphicUnit attribute) (s3dgraphy.nodes.stratigraphic_node.SpecialFindUnit attribute) (s3dgraphy.nodes.stratigraphic_node.StratigraphicEventNode attribute) (s3dgraphy.nodes.stratigraphic_node.StratigraphicNode attribute) (s3dgraphy.nodes.stratigraphic_node.StratigraphicUnit attribute) (s3dgraphy.nodes.stratigraphic_node.StructuralVirtualStratigraphicUnit attribute) (s3dgraphy.nodes.stratigraphic_node.TransformationStratigraphicUnit attribute) (s3dgraphy.nodes.stratigraphic_node.UnknownNode attribute) (s3dgraphy.nodes.stratigraphic_node.VirtualSpecialFindUnit attribute) (s3dgraphy.nodes.stratigraphic_node.WorkingUnit attribute)

node_type_map (s3dgraphy.nodes.base_node.Node attribute) nodes (s3dgraphy.graph.Graph attribute) NonStructuralVirtualStratigraphicUnit (class in s3dgraphy.nodes.stratigraphic_node)

P

ParadataNode (class in s3dgraphy.nodes.paradata_node) ParadataNodeGroup (class in s3dgraphy.nodes.group_node) parse() (s3dgraphy.importer.unified_xlsx_importer.UnifiedXLSXImporter method) print_inference_report() (s3dgraphy.temporal.inference_engine.TemporalInferenceEngine method)

print_node_connections() (s3dgraphy.graph.Graph method) PropagationRule (class in s3dgraphy.resolvers.property_resolver) (in module s3dgraphy.resolvers) prune_redundant_propagative_edges() (in module s3dgraphy.transforms.compact) push_orphan() (in module s3dgraphy.transforms.aux_tracking)

R

REAL_US_TYPES (in module s3dgraphy.classification) record_attribute_override() (in module s3dgraphy.transforms.aux_tracking) refine_edge_types() (s3dgraphy.graph.Graph method) refine_generic_connections() (s3dgraphy.graph.Graph method) register_rule() (in module s3dgraphy.resolvers.property_resolver) remove_edge() (s3dgraphy.graph.Graph method) remove_graph() (in module s3dgraphy.multigraph.multigraph) (s3dgraphy.multigraph.multigraph.MultiGraphManager method)

remove_node() (s3dgraphy.graph.Graph method) RepresentationModelDocNode (class in s3dgraphy.nodes.representation_node) RepresentationModelNode (class in s3dgraphy.nodes.representation_node) RepresentationModelSpecialFindNode (class in s3dgraphy.nodes.representation_node) RepresentationNode (class in s3dgraphy.nodes.representation_node) resolve() (in module s3dgraphy.resolvers.property_resolver) resolve_with_source() (in module s3dgraphy.resolvers.property_resolver) ReusedSpecialFind (class in s3dgraphy.nodes.stratigraphic_node) revert_injector() (in module s3dgraphy.transforms.aux_tracking)

S

s3dgraphy.classification module s3dgraphy.diagnostics module s3dgraphy.edges.edge module, [1] s3dgraphy.exporter.unified_xlsx_exporter module s3dgraphy.graph module s3dgraphy.importer.unified_xlsx_importer module s3dgraphy.multigraph.multigraph module s3dgraphy.nodes.base_node module s3dgraphy.nodes.epoch_node module s3dgraphy.nodes.geo_position_node module s3dgraphy.nodes.graph_node module s3dgraphy.nodes.group_node module s3dgraphy.nodes.paradata_node module s3dgraphy.nodes.representation_node module s3dgraphy.nodes.stratigraphic_node module s3dgraphy.resolvers module s3dgraphy.resolvers.builtin_rules module s3dgraphy.resolvers.property_resolver module

s3dgraphy.temporal module s3dgraphy.temporal.inference_engine module s3dgraphy.transforms module s3dgraphy.transforms.aux_tracking module s3dgraphy.transforms.compact module s3dgraphy.transforms.materialize_continuity module s3dgraphy.utils.utils module s3dgraphy.utils.visual_layout module SERIES_US_TYPES (in module s3dgraphy.classification) SeriesOfDocumentaryStratigraphicUnit (class in s3dgraphy.nodes.stratigraphic_node) SeriesOfNonStructuralVirtualStratigraphicUnit (class in s3dgraphy.nodes.stratigraphic_node) SeriesOfStratigraphicUnit (class in s3dgraphy.nodes.stratigraphic_node) SeriesOfStructuralVirtualStratigraphicUnit (class in s3dgraphy.nodes.stratigraphic_node) set_color() (s3dgraphy.nodes.epoch_node.EpochNode method) set_end_time() (s3dgraphy.nodes.epoch_node.EpochNode method) set_name() (s3dgraphy.nodes.epoch_node.EpochNode method) set_start_time() (s3dgraphy.nodes.epoch_node.EpochNode method) set_transform() (s3dgraphy.nodes.representation_node.RepresentationNode method) SpecialFindUnit (class in s3dgraphy.nodes.stratigraphic_node) start_time (s3dgraphy.nodes.epoch_node.EpochNode attribute) StratigraphicEventNode (class in s3dgraphy.nodes.stratigraphic_node) StratigraphicNode (class in s3dgraphy.nodes.stratigraphic_node) StratigraphicUnit (class in s3dgraphy.nodes.stratigraphic_node) strip_injected_content() (in module s3dgraphy.transforms.aux_tracking) StructuralVirtualStratigraphicUnit (class in s3dgraphy.nodes.stratigraphic_node) swimlane_aggregate (s3dgraphy.resolvers.property_resolver.PropagationRule attribute) swimlane_getter() (s3dgraphy.resolvers.property_resolver.PropagationRule method)

T

TemporalInferenceEngine (class in s3dgraphy.temporal.inference_engine) TimeBranchNodeGroup (class in s3dgraphy.nodes.group_node) to_dict() (s3dgraphy.edges.edge.Edge method), [1] (s3dgraphy.nodes.geo_position_node.GeoPositionNode method) (s3dgraphy.nodes.representation_node.RepresentationNode method)

transform (s3dgraphy.nodes.representation_node.RepresentationNode attribute) TransformationStratigraphicUnit (class in s3dgraphy.nodes.stratigraphic_node) transitive_reduction() (s3dgraphy.temporal.inference_engine.TemporalInferenceEngine method) type (s3dgraphy.nodes.representation_node.RepresentationNode attribute)

U

UnifiedXLSXExporter (class in s3dgraphy.exporter.unified_xlsx_exporter) UnifiedXLSXImporter (class in s3dgraphy.importer.unified_xlsx_importer) UnknownNode (class in s3dgraphy.nodes.stratigraphic_node) unregister_rule() (in module s3dgraphy.resolvers.property_resolver)

update_edge() (s3dgraphy.graph.Graph method) update_graph_metadata() (s3dgraphy.multigraph.multigraph.MultiGraphManager method) update_node() (s3dgraphy.graph.Graph method) url (s3dgraphy.nodes.paradata_node.ParadataNode attribute)

V

VALID_KINDS (s3dgraphy.nodes.group_node.LocationNodeGroup attribute) VALID_PROPAGATIONS (s3dgraphy.nodes.group_node.LocationNodeGroup attribute) VALID_TYPES (s3dgraphy.nodes.representation_node.RepresentationModelDocNode attribute) (s3dgraphy.nodes.representation_node.RepresentationModelNode attribute) (s3dgraphy.nodes.representation_node.RepresentationModelSpecialFindNode attribute)

validate_connection() (s3dgraphy.graph.Graph static method) validate_consistency() (s3dgraphy.temporal.inference_engine.TemporalInferenceEngine method) video (s3dgraphy.graph.Graph attribute) VIRTUAL_US_TYPES (in module s3dgraphy.classification) VirtualSpecialFindUnit (class in s3dgraphy.nodes.stratigraphic_node)

W

warnings (s3dgraphy.graph.Graph attribute) WorkingUnit (class in s3dgraphy.nodes.stratigraphic_node)

write() (s3dgraphy.exporter.unified_xlsx_exporter.UnifiedXLSXExporter method) write_unified_xlsx() (in module s3dgraphy.exporter.unified_xlsx_exporter)

Y

y_pos (s3dgraphy.nodes.group_node.GroupNode attribute)